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The Trunk CLI now includes commands for uploading and validating test results for Trunk Flaky Tests. You can install the CLI in your CI systems like this: 
curl -fsSLO --retry 3 https://trunk.io/releases/trunk && chmod +x trunk
The launcher will install the appropriate Trunk CLI binary for your system. You can use the Trunk CLI for Flaky Tests using the trunk flakytests subcommand. 
./trunk flakytests upload --junit-paths "test_output.xml" \
  --org-url-slug <TRUNK_ORG_SLUG> \
  --token $TRUNK_API_TOKEN
You can also now use the Trunk CLI to validate JUnit XML files during debugging. 
./trunk flakytests validate
Learn more in our Uploader CLI Reference docs.